Transcript: ENST00000473989.3 UBN2-001

Description

ubinuclein 2 [Source:HGNC Symbol;Acc:21931]

Gene Synonyms

FLJ25778, KIAA2030

Location

About this transcript

This transcript has 18 exons, is annotated with 20 domains and features, is associated with 34681 variant alleles and maps to 808 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000473989.3	UBN2-001	14444	1347aa	ENSP00000418648.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43655	C9J6Y5 Q6ZU65	NM_173569.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000288561.8	UBN2-201	14443	1264aa	ENSP00000288561.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J6Y5 Q6ZU65	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483726.1	UBN2-002	2897	444aa	ENSP00000417846.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000486663.1	UBN2-003	589	137aa	ENSP00000417849.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J6Y5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000609762.1	UBN2-004	4563	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 18, Coding exons: 18, Transcript length: 14,444 bps, Translation length: 1,347 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6ZU65

CCDS

This transcript is a member of the Human CCDS set: CCDS43655

Version

ENST00000473989.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000349272 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.