Transcript: ENST00000478261.1 CACNA2D3-009

Description

calcium channel, voltage-dependent, alpha 2/delta subunit 3 [Source:HGNC Symbol;Acc:15460]

Gene Synonyms

HSA272268

Location

Chromosome 3: 55,021,705-55,108,243 forward strand.

About this transcript

This transcript has 7 exons, is associated with 40372 variant alleles and maps to 258 oligo probes.

Gene

This transcript is a product of gene ENSG00000157445.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000474759.1	CACNA2D3-001	3675	1091aa	ENSP00000419101.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54598	C9JAV5 Q8IZS8	NM_018398.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000288197.5	CACNA2D3-201	3671	1091aa	ENSP00000288197.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JAV5 Q8IZS8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415676.2	CACNA2D3-202	3661	1091aa	ENSP00000389506.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JAV5 Q8IZS8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490478.1	CACNA2D3-002	3557	997aa	ENSP00000417279.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JAV5 Q8IZS8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000492460.1	CACNA2D3-006	559	126aa	ENSP00000418028.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JAV5	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000471363.1	CACNA2D3-003	3477	519aa	ENSP00000418228.1	Nonsense mediated decay		C9JAV5 Q8IZS8	-	-
ENST00000477024.1	CACNA2D3-004	1972	525aa	ENSP00000417318.1	Nonsense mediated decay		B4DSF6 C9JAV5	-	-
ENST00000468658.1	CACNA2D3-005	1826	46aa	ENSP00000417455.1	Nonsense mediated decay		F8WAV4	-	-
ENST00000478261.1	CACNA2D3-009	760	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000478466.1	CACNA2D3-007	495	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471865.1	CACNA2D3-008	740	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 760 bps,

Version

ENST00000478261.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000351410 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000478261.1 CACNA2D3-009

Summary