Transcript: ENST00000543521.1 HYDIN-011

Description

HYDIN, axonemal central pair apparatus protein [Source:HGNC Symbol;Acc:19368]

Gene Synonyms

CILD5, DKFZp434D0513, HYDIN1, HYDIN2, HYDINP1, KIAA1864, PPP1R31

Location

Chromosome 16: 70,975,290-71,008,472 reverse strand.

About this transcript

This transcript has 10 exons, is associated with 14964 variant alleles and maps to 327 oligo probes.

Gene

This transcript is a product of gene ENSG00000157423.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000393567.2	HYDIN-001	15719	5121aa	ENSP00000377197.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59269	F5GXK3 F5H8I6 I1Z9D0 K0A1M3 Q4G0P3	NM_001270974.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448089.2	HYDIN-202	3762	1214aa	ENSP00000398544.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXK3 F5H8I6 F8W6C8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000321489.5	HYDIN-002	3685	1017aa	ENSP00000314736.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10897	F5GXK3 F5H8I6 Q4G0P3	NM_017558.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448691.1	HYDIN-203	3659	1017aa	ENSP00000394826.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10897	F5GXK3 F5H8I6 Q4G0P3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538248.1	HYDIN-003	3152	950aa	ENSP00000444970.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56004	F5GXK3 F5H8I6 Q4G0P3	NM_001198542.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541601.1	HYDIN-004	3058	940aa	ENSP00000437341.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56005	F5GXK3 F5H8I6 Q4G0P3	NM_001198543.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000288168.10	HYDIN-005	2953	725aa	ENSP00000288168.10	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXK3 F5H8I6 F8WD03	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000538382.1	HYDIN-008	2480	204aa	ENSP00000437598.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000393550.2	HYDIN-201	2340	740aa	ENSP00000377181.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B5MD83 F5GXK3 F5H8I6 J3QL79	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000542890.1	HYDIN-019	634	127aa	ENSP00000446122.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000539973.1	HYDIN-015	609	39aa	ENSP00000443525.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXK3 F5H8I6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000545267.1	HYDIN-014	540	36aa	ENSP00000440202.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5GXK3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000378856.4	HYDIN-013	4479	49aa	ENSP00000463350.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000393552.2	HYDIN-009	3091	833aa	ENSP00000463767.1	Nonsense mediated decay		J3QQJ7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000539447.1	HYDIN-006	2792	151aa	ENSP00000463093.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000545230.1	HYDIN-007	2595	528aa	ENSP00000463422.1	Nonsense mediated decay		J3QL79	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000546257.1	HYDIN-023	592	43aa	ENSP00000462711.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000538568.1	HYDIN-020	525	113aa	ENSP00000462031.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000543639.1	HYDIN-018	557	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000542283.1	HYDIN-024	531	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000309900.7	HYDIN-012	4614	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000543521.1	HYDIN-011	1876	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000540892.1	HYDIN-010	1518	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000536785.1	HYDIN-017	714	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000537789.1	HYDIN-016	688	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000546297.1	HYDIN-022	551	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 0, Transcript length: 1,876 bps,

Version

ENST00000543521.1

Type

Retained intron

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000398745 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000543521.1 HYDIN-011

Summary