Transcript: ENST00000287097.5 CD109-001

Description

CD109 molecule [Source:HGNC Symbol;Acc:21685]

Gene Synonyms

CPAMD7, DKFZp762L1111, FLJ38569, RP11-525G3.1

Location

About this transcript

This transcript has 33 exons, is annotated with 17 domains and features, is associated with 54144 variant alleles and maps to 1124 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000287097.5	CD109-001	9130	1445aa	ENSP00000287097.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4982	F1C639 Q5XUM6 Q5XUM8 Q5XUN1 Q6YHK3	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000437994.2	CD109-202	9401	1428aa	ENSP00000388062.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55038	F1C639 Q5XUM6 Q5XUM8 Q5XUN1 Q6YHK3	NM_133493.3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000422508.2	CD109-201	9221	1368aa	ENSP00000404475.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55039	F1C639 Q5XUM6 Q5XUM8 Q5XUN1 Q6YHK3	NM_001159588.1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000474094.1	CD109-002	341	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 33, Coding exons: 33, Transcript length: 9,130 bps, Translation length: 1,445 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6YHK3

CCDS

This transcript is a member of the Human CCDS set: CCDS4982

Version

ENST00000287097.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000041230 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.