Transcript: ENST00000340592.5 GRIA1-005

Description

glutamate receptor, ionotropic, AMPA 1 [Source:HGNC Symbol;Acc:4571]

Gene Synonyms

GLUH1, GLUR1, GLURA, GluA1, HBGR1

Location

Chromosome 5: 152,870,376-153,191,161 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 26 domains and features, is associated with 136752 variant alleles and maps to 609 oligo probes.

Gene

This transcript is a product of gene ENSG00000155511.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000285900.5	GRIA1-001	5708	906aa	ENSP00000285900.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4322	P42261	NM_001258019.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518783.1	GRIA1-007	5233	916aa	ENSP00000428994.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58987	P42261	NM_001258021.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000340592.5	GRIA1-005	3170	906aa	ENSP00000339343.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47318	B7Z2J3 P42261	NM_001258020.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000521843.2	GRIA1-010	3069	837aa	ENSP00000427864.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58989	P42261	NM_001258023.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000448073.4	GRIA1-014	2825	916aa	ENSP00000415569.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58988	B7Z2J3 P42261	NM_001258022.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518142.1	GRIA1-013	2761	826aa	ENSP00000427920.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58986	P42261	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518862.1	GRIA1-009	586	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000517469.1	GRIA1-012	572	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000520966.1	GRIA1-011	560	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492291.1	GRIA1-003	419	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000520353.1	GRIA1-008	362	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000481559.2	GRIA1-006	2069	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000474198.1	GRIA1-002	734	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 3,170 bps, Translation length: 906 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P42261

CCDS

This transcript is a member of the Human CCDS set: CCDS47318

Version

ENST00000340592.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000258854 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000340592.5 GRIA1-005

Summary