Transcript: ENST00000398015.3 EPHB1-005

Description

EPH receptor B1 [Source:HGNC Symbol;Acc:3392]

Gene Synonyms

ELK, EPHT2, HEK6, Hek6, NET

Location

Chromosome 3: 134,514,104-134,979,309 forward strand.

About this transcript

This transcript has 16 exons, is annotated with 49 domains and features, is associated with 204433 variant alleles and maps to 777 oligo probes.

Gene

This transcript is a product of gene ENSG00000154928.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000398015.3	EPHB1-005	4672	984aa	ENSP00000381097.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46921	B3KTB2 C9J466 C9J6S4 C9JB88 C9K090 P54762	NM_004441.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000493838.1	EPHB1-006	2786	545aa	ENSP00000419574.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KTB2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000460895.1	EPHB1-004	564	112aa	ENSP00000417435.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J466 C9JB88 C9K090	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000474732.1	EPHB1-011	554	149aa	ENSP00000418352.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J466 C9J6S4 C9JB88 C9K090	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000473867.1	EPHB1-013	511	102aa	ENSP00000417216.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9J466 C9K090	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000497173.1	EPHB1-012	389	42aa	ENSP00000419688.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9K090	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000482618.1	EPHB1-007	1496	281aa	ENSP00000420338.1	Nonsense mediated decay		C9J466 C9J6S4 C9JB88 C9K090 F8WDG5	-	-
ENST00000488154.1	EPHB1-009	729	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472904.1	EPHB1-001	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467708.2	EPHB1-003	569	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467013.1	EPHB1-002	487	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000488992.1	EPHB1-014	509	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 4,672 bps, Translation length: 984 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P54762

CCDS

This transcript is a member of the Human CCDS set: CCDS46921

Version

ENST00000398015.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000357671 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000398015.3 EPHB1-005

Summary