Transcript: ENST00000285046.5 FGD5-001

Description

FYVE, RhoGEF and PH domain containing 5 [Source:HGNC Symbol;Acc:19117]

Gene Synonyms

FLJ00274, FLJ39957, ZFYVE23

Location

About this transcript

This transcript has 20 exons, is annotated with 33 domains and features, is associated with 52668 variant alleles and maps to 813 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000285046.5	FGD5-001	5720	1462aa	ENSP00000285046.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46767	A3KMQ0 Q6ZNL6	NM_152536.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543601.1	FGD5-201	5108	1178aa	ENSP00000445949.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZM68	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457774.1	FGD5-005	755	252aa	ENSP00000394827.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000476851.1	FGD5-003	2198	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000468662.1	FGD5-002	1962	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000487605.1	FGD5-004	2277	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 5,720 bps, Translation length: 1,462 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6ZNL6

CCDS

This transcript is a member of the Human CCDS set: CCDS46767

Version

ENST00000285046.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000340628 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.