Transcript: ENST00000583361.1 PRKCA-005

Description

protein kinase C, alpha [Source:HGNC Symbol;Acc:9393]

Gene Synonyms

AAG6, PKC-alpha, PKCA, PRKACA

Location

About this transcript

This transcript has 3 exons, is associated with 15666 variant alleles and maps to 60 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000413366.3	PRKCA-002	8751	672aa	ENSP00000408695.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11664	L7RSM7 P17252	NM_002737.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000284384.6	PRKCA-003	2718	150aa	ENSP00000284384.6	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000578063.1	PRKCA-001	1733	308aa	ENSP00000462087.1	Nonsense mediated decay		J3KRN5 Q7Z727	-	-
ENST00000583361.1	PRKCA-005	519	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000583775.1	PRKCA-004	321	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 519 bps,

Version

ENST00000583361.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000446975 (version 1)