Transcript: ENST00000392054.3 PID1-004

Description

phosphotyrosine interaction domain containing 1 [Source:HGNC Symbol;Acc:26084]

Gene Synonyms

FLJ20701, NYGGF4, P-CLI1, PCLI1

Location

About this transcript

This transcript has 4 exons, is annotated with 8 domains and features, is associated with 107969 variant alleles and maps to 384 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000392054.3	PID1-004	2745	248aa	ENSP00000375907.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS2471	Q4ZG81 Q7Z2X4	NM_017933.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392055.3	PID1-001	2533	217aa	ENSP00000375908.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS42830	Q4ZG81 Q7Z2X4	NM_001100818.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409462.1	PID1-002	2387	168aa	ENSP00000386826.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q4ZG81 Q7Z2X4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354069.6	PID1-005	839	250aa	ENSP00000283937.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q4ZG81 Q7Z2X4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534952.1	PID1-006	553	41aa	ENSP00000438228.1	Nonsense mediated decay		F5H314	-	-
ENST00000482518.2	PID1-003	479	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 2,745 bps, Translation length: 248 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7Z2X4

CCDS

This transcript is a member of the Human CCDS set: CCDS2471

Version

ENST00000392054.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000331809 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.