Transcript: ENST00000344657.5 SPHKAP-001

Description

SPHK1 interactor, AKAP domain containing [Source:HGNC Symbol;Acc:30619]

Gene Synonyms

KIAA1678, SKIP

Location

About this transcript

This transcript has 11 exons, is annotated with 13 domains and features, is associated with 94005 variant alleles and maps to 442 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000392056.3	SPHKAP-002	6917	1700aa	ENSP00000375909.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46537	Q2M3C7	NM_001142644.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000344657.5	SPHKAP-001	6804	1671aa	ENSP00000339886.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33389	Q2M3C7	NM_030623.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000490603.1	SPHKAP-003	544	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 6,804 bps, Translation length: 1,671 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q2M3C7

CCDS

This transcript is a member of the Human CCDS set: CCDS33389

Version

ENST00000344657.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000331749 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.