Transcript: ENST00000420835.1 JAZF1-003

Description

JAZF zinc finger 1 [Source:HGNC Symbol;Acc:28917]

Gene Synonyms

DKFZp761K2222, TIP27, ZNF802

Location

Chromosome 7: 27,886,122-28,060,418 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 3 domains and features, is associated with 74331 variant alleles and maps to 91 oligo probes.

Gene

This transcript is a product of gene ENSG00000153814.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000283928.5	JAZF1-001	3125	243aa	ENSP00000283928.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5416	Q86VZ6	NM_175061.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000427814.1	JAZF1-008	2919	230aa	ENSP00000388302.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000447620.1	JAZF1-004	585	181aa	ENSP00000415096.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JGY8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000430432.1	JAZF1-002	571	173aa	ENSP00000387976.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JWY1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000420835.1	JAZF1-003	562	158aa	ENSP00000401829.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JKQ6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000452993.1	JAZF1-005	564	80aa	ENSP00000415984.1	Nonsense mediated decay		F8WD35	-	-
ENST00000454041.1	JAZF1-006	503	66aa	ENSP00000399083.1	Nonsense mediated decay		F8WCD3	-	-
ENST00000466516.1	JAZF1-007	578	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 562 bps, Translation length: 158 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000420835.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Stop codons

This transcript has a variant, rs17156205, that causes a stop codon to be gained in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HAPMAP-LWK, CSHL-HAPMAP:HapMap-YRI.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000327762 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000420835.1 JAZF1-003

Summary