Transcript: ENST00000283916.6 TMPRSS11D-001

Description

transmembrane protease, serine 11D [Source:HGNC Symbol;Acc:24059]

Gene Synonyms

HAT

Location

Chromosome 4: 68,686,594-68,749,750 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 21 domains and features, is associated with 25201 variant alleles and maps to 513 oligo probes.

Gene

This transcript is a product of gene ENSG00000153802.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000283916.6	TMPRSS11D-001	2817	418aa	ENSP00000283916.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3518	B4DL57 O60235 Q4W5K4	NM_004262.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545541.1	TMPRSS11D-201	1592	301aa	ENSP00000442045.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DL57	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514868.1	TMPRSS11D-007	194	65aa	ENSP00000421381.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000509584.1	TMPRSS11D-005	570	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000502573.1	TMPRSS11D-004	564	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000508409.1	TMPRSS11D-003	542	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000511931.1	TMPRSS11D-008	512	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505533.1	TMPRSS11D-002	2448	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000502822.1	TMPRSS11D-006	678	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 2,817 bps, Translation length: 418 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O60235

CCDS

This transcript is a member of the Human CCDS set: CCDS3518

Version

ENST00000283916.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000251430 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000283916.6 TMPRSS11D-001

Summary