Transcript: ENST00000468690.1 HNRNPU-006

Description

heterogeneous nuclear ribonucleoprotein U (scaffold attachment factor A) [Source:HGNC Symbol;Acc:5048]

Gene Synonyms

HNRPU, SAF-A, SAFA, U21.1, hnRNP U, hnRNPU

Location

Chromosome 1: 245,019,716-245,020,378 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 358 variant alleles and maps to 170 oligo probes.

Gene

This transcript is a product of gene ENSG00000153187.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000444376.2	HNRNPU-001	5940	806aa	ENSP00000393151.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31081	B4DLR3 Q00839 Q7Z4Q5 Q9UEL2	NM_031844.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000283179.9	HNRNPU-002	3704	825aa	ENSP00000283179.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41479	Q00839 Q7Z4Q5 Q96BA7 Q9UEL2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000440865.1	HNRNPU-003	1067	241aa	ENSP00000410728.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5RI18	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000366525.3	HNRNPU-004	2535	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000476241.1	HNRNPU-008	1687	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000483966.1	HNRNPU-007	1438	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000465881.1	HNRNPU-005	741	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000468690.1	HNRNPU-006	561	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 561 bps,

Version

ENST00000468690.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000097403 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000468690.1 HNRNPU-006

Summary