Transcript: ENST00000379617.2 TRIM36-006

Description

tripartite motif containing 36 [Source:HGNC Symbol;Acc:16280]

Gene Synonyms

HAPRIN, RBCC728, RNF98

Location

Chromosome 5: 114,512,820-114,516,243 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 1928 variant alleles and maps to 217 oligo probes.

Gene

This transcript is a product of gene ENSG00000152503.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000513154.1	TRIM36-004	4218	716aa	ENSP00000423934.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PBG3 E9PFI8	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000282369.3	TRIM36-001	4050	728aa	ENSP00000282369.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4115	E9PBG3 Q9NQ86	NM_018700.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514154.1	TRIM36-002	1952	573aa	ENSP00000424259.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PBG3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000379617.2	TRIM36-006	1322	61aa	ENSP00000368937.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34212	Q9NQ86	NM_001017398.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508894.1	TRIM36-009	786	170aa	ENSP00000424743.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RAU9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000379618.2	TRIM36-003	693	60aa	ENSP00000368938.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34211	Q9NQ86	NM_001017397.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000515104.1	TRIM36-010	805	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000513485.1	TRIM36-011	631	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510222.1	TRIM36-008	585	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000511701.1	TRIM36-007	310	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 1,322 bps, Translation length: 61 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9NQ86

CCDS

This transcript is a member of the Human CCDS set: CCDS34212

Version

ENST00000379617.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000371019 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000379617.2 TRIM36-006

Summary