Transcript: ENST00000392455.3 CCDC50-001

Description

coiled-coil domain containing 50 [Source:HGNC Symbol;Acc:18111]

Gene Synonyms

C3orf6, DFNA44, YMER, Ymer

Location

About this transcript

This transcript has 11 exons, is annotated with 6 domains and features, is associated with 29744 variant alleles and maps to 852 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000392455.3	CCDC50-001	8429	306aa	ENSP00000376249.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33913	Q8IVM0	NM_174908.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392456.3	CCDC50-002	2454	482aa	ENSP00000376250.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33912	Q8IVM0	NM_178335.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000460064.1	CCDC50-003	420	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 8,429 bps, Translation length: 306 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8IVM0

CCDS

This transcript is a member of the Human CCDS set: CCDS33913

Version

ENST00000392455.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000343315 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.