Transcript: ENST00000378249.1 DCLRE1C-003

Description

DNA cross-link repair 1C [Source:HGNC Symbol;Acc:17642]

Gene Synonyms

A-SCID, ARTEMIS, ASCID, DCLREC1C, FLJ11360, RS-SCID, SCIDA, SNM1C, hSNM1C

Location

Chromosome 10: 14,950,170-14,996,047 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 7 domains and features, is associated with 23928 variant alleles and maps to 465 oligo probes.

Gene

This transcript is a product of gene ENSG00000152457.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000453695.2	DCLRE1C-201	3674	572aa	ENSP00000400529.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31150	B3KSJ7 Q96SD1	NM_001033855.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378289.4	DCLRE1C-008	3532	434aa	ENSP00000367538.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q96SD1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378255.1	DCLRE1C-005	2807	572aa	ENSP00000367503.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31150	B3KSJ7 Q96SD1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396817.2	DCLRE1C-004	2761	572aa	ENSP00000380030.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31150	B3KSJ7 Q96SD1	NM_001033858.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378246.2	DCLRE1C-001	2637	577aa	ENSP00000367492.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7105	B3KSJ7 Q96SD1	NM_022487.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378254.1	DCLRE1C-006	2485	572aa	ENSP00000367502.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31150	B3KSJ7 Q96SD1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378258.1	DCLRE1C-007	2463	572aa	ENSP00000367506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31150	B3KSJ7 Q96SD1	NM_001033857.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378278.2	DCLRE1C-009	2354	692aa	ENSP00000367527.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS31149	B3KSJ7 Q96SD1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378249.1	DCLRE1C-003	2246	577aa	ENSP00000367496.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7105	B3KSJ7 Q96SD1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357717.2	DCLRE1C-002	2228	577aa	ENSP00000350349.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7105	B3KSJ7 Q96SD1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000378242.1	DCLRE1C-010	1933	345aa	ENSP00000367488.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KSJ7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000418843.1	DCLRE1C-011	901	117aa	ENSP00000391428.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000456122.1	DCLRE1C-012	877	57aa	ENSP00000413180.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000378241.1	DCLRE1C-013	833	84aa	ENSP00000367487.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000492201.1	DCLRE1C-014	960	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489845.1	DCLRE1C-016	294	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489161.1	DCLRE1C-015	173	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 10, Transcript length: 2,246 bps, Translation length: 577 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q96SD1

CCDS

This transcript is a member of the Human CCDS set: CCDS7105

Version

ENST00000378249.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000046928 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000378249.1 DCLRE1C-003

Summary