Transcript: ENST00000338635.6 XRCC4-002

Description

X-ray repair complementing defective repair in Chinese hamster cells 4 [Source:HGNC Symbol;Acc:12831]

Location

About this transcript

This transcript has 8 exons, is annotated with 7 domains and features, is associated with 111648 variant alleles and maps to 511 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000282268.3	XRCC4-201	1696	334aa	ENSP00000282268.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4058	Q13426	NM_022550.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000511817.1	XRCC4-003	1636	336aa	ENSP00000421491.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4059	Q13426	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000338635.6	XRCC4-002	1579	336aa	ENSP00000342011.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4059	Q13426	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000396027.4	XRCC4-001	1530	334aa	ENSP00000379344.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4058	Q13426	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509268.1	XRCC4-005	1567	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000542685.1	XRCC4-004	1243	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,579 bps, Translation length: 336 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13426

CCDS

This transcript is a member of the Human CCDS set: CCDS4059

Version

ENST00000338635.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000254090 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.