Transcript: ENST00000482804.1 SCHIP1-005

Description

schwannomin interacting protein 1 [Source:HGNC Symbol;Acc:15678]

Gene Synonyms

SCHIP-1

Location

Chromosome 3: 159,570,728-159,615,138 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 16885 variant alleles and maps to 338 oligo probes.

Gene

This transcript is a product of gene ENSG00000151967.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000482804.1	SCHIP1-005	1799	260aa	ENSP00000419230.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JWG6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000445224.2	SCHIP1-004	1645	244aa	ENSP00000404860.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56294	Q9P0W5	NM_001197109.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000495954.1	SCHIP1-012	1000	52aa	ENSP00000420376.1	Nonsense mediated decay		F8WDG0	-	-
ENST00000483730.1	SCHIP1-013	806	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482885.1	SCHIP1-006	5949	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472483.1	SCHIP1-014	765	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461058.1	SCHIP1-011	566	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475932.1	SCHIP1-015	213	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,799 bps, Translation length: 260 residues

Version

ENST00000482804.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000352561 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000482804.1 SCHIP1-005

Summary