Transcript: ENST00000445224.2 SCHIP1-004

Description

schwannomin interacting protein 1 [Source:HGNC Symbol;Acc:15678]

Gene Synonyms

SCHIP-1

Location

Chromosome 3: 159,557,650-159,615,149 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 9 domains and features, is associated with 22295 variant alleles and maps to 396 oligo probes.

Gene

This transcript is a product of gene ENSG00000151967.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000482804.1	SCHIP1-005	1799	260aa	ENSP00000419230.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JWG6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000445224.2	SCHIP1-004	1645	244aa	ENSP00000404860.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS56294	Q9P0W5	NM_001197109.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000495954.1	SCHIP1-012	1000	52aa	ENSP00000420376.1	Nonsense mediated decay		F8WDG0	-	-
ENST00000483730.1	SCHIP1-013	806	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000482885.1	SCHIP1-006	5949	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472483.1	SCHIP1-014	765	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000461058.1	SCHIP1-011	566	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000475932.1	SCHIP1-015	213	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 1,645 bps, Translation length: 244 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9P0W5

CCDS

This transcript is a member of the Human CCDS set: CCDS56294

Version

ENST00000445224.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000352560 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000445224.2 SCHIP1-004

Summary