Transcript: ENST00000467056.1 ITPR1-003

Description

inositol 1,4,5-trisphosphate receptor, type 1 [Source:HGNC Symbol;Acc:6180]

Gene Synonyms

INSP3R1, IP3R, IP3R1, Insp3r1, SCA15, SCA16, SCA29

Location

Chromosome 3: 4,535,034-4,687,692 forward strand.

About this transcript

This transcript has 10 exons, is associated with 73333 variant alleles and maps to 238 oligo probes.

Gene

This transcript is a product of gene ENSG00000150995.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000302640.8	ITPR1-201	10197	2743aa	ENSP00000306253.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54551	Q14643	NM_001168272.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000354582.6	ITPR1-202	10197	2743aa	ENSP00000346595.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EVP7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423119.2	ITPR1-203	10098	2710aa	ENSP00000405934.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G5E9P1	NM_001099952.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000357086.4	ITPR1-001	9858	2710aa	ENSP00000349597.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46740	Q14643	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456211.2	ITPR1-002	9813	2695aa	ENSP00000397885.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54550	Q14643	NM_002222.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000443694.2	ITPR1-004	9402	2743aa	ENSP00000401671.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54551	Q14643	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000544951.1	ITPR1-204	2799	721aa	ENSP00000440564.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7ZMI3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000463980.1	ITPR1-011	2215	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000477577.1	ITPR1-005	2151	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000493491.1	ITPR1-010	1793	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000490572.1	ITPR1-017	632	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491868.1	ITPR1-012	264	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000467056.1	ITPR1-003	1483	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000478515.1	ITPR1-020	910	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000487016.1	ITPR1-013	697	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000472205.1	ITPR1-019	652	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000479831.1	ITPR1-015	591	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000494681.1	ITPR1-014	580	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000467545.1	ITPR1-018	571	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000481415.1	ITPR1-016	552	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 10, Coding exons: 0, Transcript length: 1,483 bps,

Version

ENST00000467056.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000337981 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000467056.1 ITPR1-003

Summary