Transcript: ENST00000280330.8 FAM173B-003

Description

family with sequence similarity 173, member B [Source:HGNC Symbol;Acc:27029]

Gene Synonyms

JS-2, LOC134145

Location

About this transcript

This transcript has 6 exons, is annotated with 3 domains and features, is associated with 10567 variant alleles and maps to 347 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000280330.8	FAM173B-003	1928	69aa	ENSP00000280330.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding		J3KN90	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000511437.1	FAM173B-001	1423	233aa	ENSP00000422338.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43301	J3KN90 Q6P4H8	NM_199133.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510047.1	FAM173B-002	1160	216aa	ENSP00000420876.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58942	Q6P4H8	NM_001258388.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506108.2	FAM173B-006	751	149aa	ENSP00000427453.1	Nonsense mediated decay		D6RIE0	-	-
ENST00000504390.1	FAM173B-004	571	109aa	ENSP00000424210.1	Nonsense mediated decay		D6RBE3	-	-
ENST00000510052.1	FAM173B-007	534	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000508553.1	FAM173B-005	789	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 2, Transcript length: 1,928 bps, Translation length: 69 residues

Version

ENST00000280330.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000366050 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.