Transcript: ENST00000508078.1 LPHN3-017

Description

latrophilin 3 [Source:HGNC Symbol;Acc:20974]

Gene Synonyms

CIRL3, KIAA0768, LEC3

Location

Chromosome 4: 62,799,561-62,812,795 forward strand.

About this transcript

This transcript has 4 exons, is associated with 5878 variant alleles and maps to 102 oligo probes.

Gene

This transcript is a product of gene ENSG00000150471.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000512091.2	LPHN3-001	12636	1240aa	ENSP00000423388.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z2G2 Q4W5J9 Q9HAR2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514591.1	LPHN3-003	6297	1469aa	ENSP00000422533.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54768	E9PE04 Q4W5J9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000545650.1	LPHN3-201	6124	1469aa	ENSP00000439831.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54768	E9PE04 Q4W5J9	NM_015236.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000509896.1	LPHN3-013	5069	1308aa	ENSP00000423787.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z2G2 E7EUP0 Q4W5J9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000511324.1	LPHN3-014	5042	1299aa	ENSP00000425033.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ESV6 Q4W5J9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508693.1	LPHN3-011	5009	1351aa	ENSP00000424030.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EN28 Q4W5J9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507164.1	LPHN3-004	4982	1342aa	ENSP00000421476.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EX52 Q4W5J9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506720.1	LPHN3-008	4962	1580aa	ENSP00000420931.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EUW2 Q4W5J9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506746.1	LPHN3-009	4935	1571aa	ENSP00000425884.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ETE3 Q4W5J9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507625.1	LPHN3-016	4843	1528aa	ENSP00000421372.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EVD6 Q4W5J9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000506700.1	LPHN3-015	4838	1231aa	ENSP00000424120.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EMR3 Q4W5J9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504896.1	LPHN3-012	4816	1283aa	ENSP00000423434.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ENK1 Q4W5J9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514157.1	LPHN3-006	4789	1274aa	ENSP00000425201.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7ES20 Q4W5J9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000508946.1	LPHN3-007	4758	1512aa	ENSP00000421627.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EW95 Q4W5J9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514996.1	LPHN3-010	4731	1503aa	ENSP00000424258.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PBG4 Q4W5J9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000502815.1	LPHN3-002	4284	918aa	ENSP00000424402.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000508078.1	LPHN3-017	587	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000509779.1	LPHN3-019	527	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000509089.1	LPHN3-018	640	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 587 bps,

Version

ENST00000508078.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000361779 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000508078.1 LPHN3-017

Summary