Transcript: ENST00000526841.1 BTBD10-009

Description

BTB (POZ) domain containing 10 [Source:HGNC Symbol;Acc:21445]

Gene Synonyms

GMRP-1, GMRP1, MGC13007

Location

Chromosome 11: 13,443,294-13,484,728 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 2 domains and features, is associated with 16589 variant alleles and maps to 92 oligo probes.

Gene

This transcript is a product of gene ENSG00000148925.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000278174.5	BTBD10-001	2504	475aa	ENSP00000278174.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS7811	B7Z503 D3DQW7 E9PKM7 E9PPD8 Q6P5W1 Q7L2U6 Q9BSF8	NM_032320.5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000530907.1	BTBD10-005	1871	483aa	ENSP00000431186.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z228 B7Z503 Q6P5W1 Q7L2U6	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000528120.1	BTBD10-004	1662	427aa	ENSP00000435257.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B7Z503 Q6P5W1 Q7L2U6	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000529708.1	BTBD10-008	616	66aa	ENSP00000434579.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PKM7 E9PPD8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000526841.1	BTBD10-009	508	64aa	ENSP00000431572.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PKM7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000527102.2	BTBD10-003	2338	202aa	ENSP00000435303.2	Nonsense mediated decay		E9PKM7 E9PKU9 E9PPD8	-	-
ENST00000525108.1	BTBD10-011	1139	36aa	ENSP00000434857.1	Nonsense mediated decay		E9PN21	-	-
ENST00000532261.1	BTBD10-006	560	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000527858.1	BTBD10-010	249	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000525864.1	BTBD10-002	1325	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000525661.1	BTBD10-012	1125	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 508 bps, Translation length: 64 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000526841.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000386207 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000526841.1 BTBD10-009

Summary