Transcript: ENST00000277541.6 NOTCH1-001

Description

notch 1 [Source:HGNC Symbol;Acc:7881]

Gene Synonyms

TAN1, hN1

Location

About this transcript

This transcript has 34 exons, is annotated with 344 domains and features, is associated with 46583 variant alleles and maps to 953 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000277541.6	NOTCH1-001	9371	2555aa	ENSP00000277541.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43905	H9CXX2 P46531	NM_017617.3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000491649.1	NOTCH1-003	743	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000494783.1	NOTCH1-002	652	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 34, Coding exons: 34, Transcript length: 9,371 bps, Translation length: 2,555 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P46531

CCDS

This transcript is a member of the Human CCDS set: CCDS43905

Version

ENST00000277541.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000055087 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.