Transcript: ENST00000395785.2 EBAG9-002

Description

estrogen receptor binding site associated, antigen, 9 [Source:HGNC Symbol;Acc:3123]

Gene Synonyms

EB9, PDAF, RCAS1

Location

Chromosome 8: 110,551,940-110,577,389 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 5 domains and features, is associated with 10840 variant alleles and maps to 448 oligo probes.

Gene

This transcript is a product of gene ENSG00000147654.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000337573.5	EBAG9-001	2379	213aa	ENSP00000337675.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6313	E9PJ38 E9PJ40 E9PN10 O00559 Q6R3F1	NM_004215.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000395785.2	EBAG9-002	1467	213aa	ENSP00000379131.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6313	E9PJ38 E9PJ40 E9PN10 O00559 Q6R3F1	NM_198120.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000534318.1	EBAG9-006	813	78aa	ENSP00000435689.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJ38	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000531677.1	EBAG9-008	777	258aa	ENSP00000432082.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJ38 E9PJ40 Q5Y8C7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000530629.1	EBAG9-005	706	197aa	ENSP00000434878.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJ38 E9PJ40 E9PN10	NM_001278938.1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000529931.1	EBAG9-004	413	41aa	ENSP00000435687.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PJ40	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000527709.1	EBAG9-003	939	153aa	ENSP00000437214.1	Nonsense mediated decay		E9PJ38 E9PJ40 E9PND3	-	-
ENST00000529502.1	EBAG9-007	792	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,467 bps, Translation length: 213 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O00559

CCDS

This transcript is a member of the Human CCDS set: CCDS6313

Version

ENST00000395785.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000385482 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000395785.2 EBAG9-002

Summary