Transcript: ENST00000356297.4 PXDNL-002

Description

peroxidasin homolog (Drosophila)-like [Source:HGNC Symbol;Acc:26359]

Gene Synonyms

FLJ25471, PMR1, PRM1, VPO2

Location

About this transcript

This transcript has 23 exons, is annotated with 69 domains and features, is associated with 219474 variant alleles and maps to 644 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000356297.4	PXDNL-002	4805	1463aa	ENSP00000348645.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS47855	A1KZ92	NM_144651.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543296.1	PXDNL-201	4554	1316aa	ENSP00000444865.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A1KZ92 K4DIA6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000522933.1	PXDNL-003	1925	537aa	ENSP00000428114.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000522628.1	PXDNL-004	2258	582aa	ENSP00000429855.1	Nonsense mediated decay		K4DIA6	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000519183.1	PXDNL-001	768	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 4,805 bps, Translation length: 1,463 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A1KZ92

CCDS

This transcript is a member of the Human CCDS set: CCDS47855

Version

ENST00000356297.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000377905 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.