Transcript: ENST00000519872.1 ERLIN2-013

Description

ER lipid raft associated 2 [Source:HGNC Symbol;Acc:1356]

Gene Synonyms

C8orf2, Erlin-2, NET32, SPFH2, SPG18

Location

Chromosome 8: 37,594,119-37,598,232 forward strand.

About this transcript

This transcript has 3 exons, is associated with 1080 variant alleles and maps to 81 oligo probes.

Gene

This transcript is a product of gene ENSG00000147475.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000276461.5	ERLIN2-001	6073	339aa	ENSP00000276461.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6095	E5RHW4 O94905	NM_007175.6	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518586.1	ERLIN2-007	2623	206aa	ENSP00000427847.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O94905	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523887.1	ERLIN2-006	2347	206aa	ENSP00000429903.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O94905	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000335171.6	ERLIN2-008	1742	152aa	ENSP00000335220.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34879	O94905	NM_001003790.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000519638.1	ERLIN2-010	1718	339aa	ENSP00000428112.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS6095	E5RHW4 O94905	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000521644.1	ERLIN2-009	1602	338aa	ENSP00000429621.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RHW4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000397228.2	ERLIN2-002	1473	152aa	ENSP00000380405.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34879	O94905	NM_001003791.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000523107.1	ERLIN2-015	771	206aa	ENSP00000473292.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		O94905	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000518526.1	ERLIN2-014	663	197aa	ENSP00000429229.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RJ09	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000521993.2	ERLIN2-018	764	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000519872.1	ERLIN2-013	550	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 550 bps,

Version

ENST00000519872.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000376791 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000519872.1 ERLIN2-013

Summary