Transcript: ENST00000394299.2 GPC3-201

Description

glypican 3 [Source:HGNC Symbol;Acc:4451]

Gene Synonyms

DGSX, GTR2-2, MXR7, OCI-5, OCI5, SDYS, SGB, SGBS, SGBS1

Location

About this transcript

This transcript has 9 exons, is annotated with 8 domains and features, is associated with 119740 variant alleles and maps to 464 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000370818.3	GPC3-001	2568	580aa	ENSP00000359854.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS14638	I6QTG3 P51654	NM_004484.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394299.2	GPC3-201	2379	603aa	ENSP00000377836.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55496	P51654	NM_001164617.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543339.1	GPC3-202	1581	526aa	ENSP00000444222.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55495	P51654	NM_001164619.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000406757.2	GPC3-002	836	256aa	ENSP00000385307.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,379 bps, Translation length: 603 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P51654

CCDS

This transcript is a member of the Human CCDS set: CCDS55496

Version

ENST00000394299.2

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.