Transcript: ENST00000419841.1 C7orf43-005

Description

chromosome 7 open reading frame 43 [Source:HGNC Symbol;Acc:25604]

Gene Synonyms

FLJ10925

Location

Chromosome 7: 99,752,447-99,755,382 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 3 domains and features, is associated with 1322 variant alleles and maps to 340 oligo probes.

Gene

This transcript is a product of gene ENSG00000146826.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000316937.3	C7orf43-001	2520	580aa	ENSP00000324741.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5687	B3KNS5 C9JMZ9 F8WFE0 Q8WVR3	NM_018275.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456769.1	C7orf43-008	2046	486aa	ENSP00000389672.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KNS5 C9JMZ9	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000457641.1	C7orf43-010	2005	311aa	ENSP00000396432.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KNS5 C9JMZ9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419841.1	C7orf43-005	1500	348aa	ENSP00000406326.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KNS5 C9JMZ9 E9PFF9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000394035.2	C7orf43-007	1255	156aa	ENSP00000377600.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JMZ9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000419037.1	C7orf43-004	2200	169aa	ENSP00000399397.1	Nonsense mediated decay		F8WFE0	-	-
ENST00000448720.1	C7orf43-006	1616	150aa	ENSP00000400075.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000498638.1	C7orf43-012	626	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472061.1	C7orf43-011	356	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000470260.1	C7orf43-014	1103	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 1,500 bps, Translation length: 348 residues

Version

ENST00000419841.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000337410 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000419841.1 C7orf43-005

Summary