Transcript: ENST00000381083.4 IGFBP3-020

Description

insulin-like growth factor binding protein 3 [Source:HGNC Symbol;Acc:5472]

Gene Synonyms

BP-53, IBP3

Location

Chromosome 7: 45,953,404-45,960,850 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 26 domains and features, is associated with 3394 variant alleles and maps to 220 oligo probes.

Gene

This transcript is a product of gene ENSG00000146674.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000275521.6	IGFBP3-001	2262	291aa	ENSP00000275521.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5505	B3KPF0 B4DN53 P17936	NM_001013398.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381086.5	IGFBP3-008	2217	194aa	ENSP00000370476.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KPF0 B3KWK7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000381083.4	IGFBP3-020	1050	297aa	ENSP00000370473.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34632	B3KPF0 P17936	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000428530.1	IGFBP3-018	894	143aa	ENSP00000390298.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KPF0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000417621.1	IGFBP3-019	810	153aa	ENSP00000399116.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B3KPF0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000448817.1	IGFBP3-014	571	132aa	ENSP00000389668.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JMX4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000465642.1	IGFBP3-015	663	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460209.1	IGFBP3-017	583	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000460477.1	IGFBP3-016	574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,050 bps, Translation length: 297 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P17936

CCDS

This transcript is a member of the Human CCDS set: CCDS34632

Version

ENST00000381083.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000353842 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000381083.4 IGFBP3-020

Summary