Transcript: ENST00000394123.3 G3BP1-001

Description

GTPase activating protein (SH3 domain) binding protein 1 [Source:HGNC Symbol;Acc:30292]

Gene Synonyms

G3BP, HDH-VIII

Location

Chromosome 5: 151,151,471-151,192,346 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 15 domains and features, is associated with 19138 variant alleles and maps to 907 oligo probes.

Gene

This transcript is a product of gene ENSG00000145907.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394123.3	G3BP1-001	10240	466aa	ENSP00000377681.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4319	E5RH42 E5RI46 E5RIF8 F5H4D6 Q13283 Q5U0Q1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000356245.3	G3BP1-002	2803	466aa	ENSP00000348578.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS4319	E5RH42 E5RI46 E5RIF8 F5H4D6 Q13283 Q5U0Q1	NM_198395.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543466.1	G3BP1-201	1763	284aa	ENSP00000445035.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F5H4D6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000520006.1	G3BP1-012	754	105aa	ENSP00000428469.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RI46	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000507878.2	G3BP1-009	577	148aa	ENSP00000429250.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RIZ6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000523519.1	G3BP1-007	535	106aa	ENSP00000430738.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RI46 E5RIF8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000520578.1	G3BP1-008	530	117aa	ENSP00000429920.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E5RH42 E5RI46 E5RIF8	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000520177.1	G3BP1-006	2700	122aa	ENSP00000427810.1	Nonsense mediated decay		E5RH42 E5RI46 E5RIF8 Q5HYE9	-	-
ENST00000522761.1	G3BP1-005	1763	153aa	ENSP00000430480.1	Nonsense mediated decay		E5RH42 E5RI46 E5RIF8 E5RJU8	-	-
ENST00000522666.1	G3BP1-013	783	37aa	ENSP00000429316.1	Nonsense mediated decay		E5RH00	-	-
ENST00000522367.1	G3BP1-011	580	122aa	ENSP00000428926.1	Nonsense mediated decay		E5RH42 E5RI46 E5RIF8 Q5HYE9	-	-
ENST00000517947.1	G3BP1-010	558	37aa	ENSP00000430045.1	Nonsense mediated decay		E5RH00	-	-
ENST00000519832.1	G3BP1-004	1173	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000518726.1	G3BP1-003	869	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 10,240 bps, Translation length: 466 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q13283

CCDS

This transcript is a member of the Human CCDS set: CCDS4319

Version

ENST00000394123.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000252431 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000394123.3 G3BP1-001

Summary