Transcript: ENST00000274140.5 MARCH6-001

Description

membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:30550]

Gene Synonyms

DOA10, KIAA0597, MARCH-VI, RNF176, TEB4

Location

Chromosome 5: 10,353,879-10,440,500 forward strand.

About this transcript

This transcript has 26 exons, is annotated with 27 domains and features, is associated with 38508 variant alleles and maps to 1189 oligo probes.

Gene

This transcript is a product of gene ENSG00000145495.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000274140.5	MARCH6-001	9569	910aa	ENSP00000274140.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS34135	O60337	NM_005885.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000449913.2	MARCH6-005	3062	862aa	ENSP00000414643.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59487	O60337	NM_001270660.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000503788.1	MARCH6-004	2874	805aa	ENSP00000425930.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59488	O60337	NM_001270661.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510792.1	MARCH6-006	1963	608aa	ENSP00000424512.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000502795.1	MARCH6-007	580	77aa	ENSP00000426000.1	Nonsense mediated decay		D6RHY7	-	-
ENST00000606497.1	MARCH6-016	1334	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505253.1	MARCH6-010	676	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000507863.1	MARCH6-015	582	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510872.1	MARCH6-014	577	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000511802.1	MARCH6-002	4734	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000512449.1	MARCH6-012	832	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000514961.1	MARCH6-009	703	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000506131.1	MARCH6-008	311	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000514312.1	MARCH6-013	253	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 26, Coding exons: 26, Transcript length: 9,569 bps, Translation length: 910 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O60337

CCDS

This transcript is a member of the Human CCDS set: CCDS34135

Version

ENST00000274140.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000366919 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000274140.5 MARCH6-001

Summary