Transcript: ENST00000469176.1 NDUFS6-002

Description

NADH dehydrogenase (ubiquinone) Fe-S protein 6, 13kDa (NADH-coenzyme Q reductase) [Source:HGNC Symbol;Acc:7713]

Gene Synonyms

CI-13kA, CI-13kD-A, CI13KDA

Location

Chromosome 5: 1,801,529-1,814,813 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 3 domains and features, is associated with 6463 variant alleles and maps to 154 oligo probes.

Gene

This transcript is a product of gene ENSG00000145494.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000274137.5	NDUFS6-001	1082	124aa	ENSP00000274137.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3866	O75380 Q6IBC4	NM_004553.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000469176.1	NDUFS6-002	550	172aa	ENSP00000422557.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RBT3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000510329.1	NDUFS6-003	260	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 550 bps, Translation length: 172 residues

Version

ENST00000469176.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Stop codons

This transcript has a variant, rs4147773, that causes a stop codon to be lost in at least 10% of HapMap or 1000 Genome population(s) CSHL-HAPMAP:HapMap-HCB, CSHL-HAPMAP:HapMap-YRI, CSHL-HAPMAP:HapMap-JPT, CSHL-HAPMAP:HapMap-CEU.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000314003 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000469176.1 NDUFS6-002

Summary