Transcript: ENST00000510786.1 MARCH1-005

Description

membrane-associated ring finger (C3HC4) 1, E3 ubiquitin protein ligase [Source:HGNC Symbol;Acc:26077]

Gene Synonyms

FLJ20668, MARCH-I, RNF171

Location

Chromosome 4: 164,449,802-164,534,665 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 34933 variant alleles and maps to 207 oligo probes.

Gene

This transcript is a product of gene ENSG00000145416.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000503008.1	MARCH1-002	5877	289aa	ENSP00000427223.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54814	D6REN1 Q8TCQ1	NM_001166373.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000274056.7	MARCH1-201	5367	289aa	ENSP00000274056.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS54814	D6REN1 Q8TCQ1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000514618.1	MARCH1-003	3903	545aa	ENSP00000421322.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6RGC4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000339875.5	MARCH1-004	2476	272aa	ENSP00000345676.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3806	Q8TCQ1	NM_017923.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000507270.1	MARCH1-007	656	141aa	ENSP00000426731.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D6REN1	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000510786.1	MARCH1-005	1051	144aa	ENSP00000424089.1	Nonsense mediated decay		B7Z739	-	-
ENST00000508725.1	MARCH1-001	657	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000503104.1	MARCH1-011	616	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000515471.1	MARCH1-009	584	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000510075.1	MARCH1-010	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505391.1	MARCH1-008	550	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000512214.1	MARCH1-006	2912	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000505517.1	MARCH1-014	558	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000511245.1	MARCH1-015	554	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000510696.1	MARCH1-013	499	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 3, Transcript length: 1,051 bps, Translation length: 144 residues

Version

ENST00000510786.1

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000364496 (version 1)

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Transcript: ENST00000510786.1 MARCH1-005

Summary