Transcript: ENST00000503288.2 ATP10D-003

Description

ATPase, class V, type 10D [Source:HGNC Symbol;Acc:13549]

Gene Synonyms

ATPVD, KIAA1487

Location

About this transcript

This transcript has 16 exons, is annotated with 8 domains and features, is associated with 22273 variant alleles and maps to 549 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000273859.3	ATP10D-001	6655	1426aa	ENSP00000273859.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS3476	Q9P241	NM_020453.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000504445.1	ATP10D-002	2550	535aa	ENSP00000420909.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q6PEW3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000503288.2	ATP10D-003	4146	224aa	ENSP00000421536.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000512393.1	ATP10D-009	632	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505476.1	ATP10D-008	581	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000505277.1	ATP10D-010	569	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000507889.1	ATP10D-005	566	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 16, Coding exons: 5, Transcript length: 4,146 bps, Translation length: 224 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000503288.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000361589 (version 3)