Transcript: ENST00000273582.5 KIAA0226-001

Description

KIAA0226 [Source:HGNC Symbol;Acc:28991]

Gene Synonyms

RUBICON, rubicon, rundataxin

Location

Chromosome 3: 197,398,264-197,476,570 reverse strand.

About this transcript

This transcript has 21 exons, is annotated with 16 domains and features, is associated with 36978 variant alleles and maps to 1188 oligo probes.

Gene

This transcript is a product of gene ENSG00000145016.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000273582.5	KIAA0226-001	6955	927aa	ENSP00000273582.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46987	B4DIJ0 Q92622	NM_001145642.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413360.1	KIAA0226-005	3801	934aa	ENSP00000405115.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DIJ0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000389665.5	KIAA0226-201	2949	921aa	ENSP00000374316.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q92622	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000296343.5	KIAA0226-011	2919	972aa	ENSP00000296343.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS43195	B4DIJ0 Q92622	NM_014687.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000415452.1	KIAA0226-004	2665	680aa	ENSP00000409618.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000449205.1	KIAA0226-003	1603	435aa	ENSP00000390962.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PEM3 Q8N4U6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000447048.1	KIAA0226-009	442	147aa	ENSP00000411894.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7C3H3	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000467303.1	KIAA0226-006	939	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474214.1	KIAA0226-008	615	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000472149.1	KIAA0226-007	416	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000471364.1	KIAA0226-010	434	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 21, Coding exons: 20, Transcript length: 6,955 bps, Translation length: 927 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q92622

CCDS

This transcript is a member of the Human CCDS set: CCDS46987

Version

ENST00000273582.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000340174 (version 3)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000273582.5 KIAA0226-001

Summary