Transcript: ENST00000273221.4 IQSEC1-001

Description

IQ motif and Sec7 domain 1 [Source:HGNC Symbol;Acc:29112]

Gene Synonyms

ARF-GEP100, ARFGEP100, BRAG2, GEP100, KIAA0763

Location

About this transcript

This transcript has 14 exons, is annotated with 19 domains and features, is associated with 33980 variant alleles and maps to 584 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000273221.4	IQSEC1-001	5279	963aa	ENSP00000273221.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS33703	Q6DN90	NM_014869.5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000450726.1	IQSEC1-002	3745	937aa	ENSP00000397811.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000429247.1	IQSEC1-003	3583	1160aa	ENSP00000402299.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		C9JMG9	NM_001134382.2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000473088.1	IQSEC1-004	545	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000474467.1	IQSEC1-005	436	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 5,279 bps, Translation length: 963 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6DN90

CCDS

This transcript is a member of the Human CCDS set: CCDS33703

Version

ENST00000273221.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000339865 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.