Transcript: ENST00000497505.1 NBEAL1-005

Description

neurobeachin-like 1 [Source:HGNC Symbol;Acc:20681]

Gene Synonyms

A530083I02Rik, ALS2CR16, ALS2CR17, MGC164581

Location

Chromosome 2: 203,879,602-203,950,935 forward strand.

About this transcript

This transcript has 11 exons, is associated with 27985 variant alleles and maps to 415 oligo probes.

Gene

This transcript is a product of gene ENSG00000144426.14 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000449802.1	NBEAL1-001	10938	2694aa	ENSP00000399903.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS46495	Q6ZS30	NM_001114132.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000414576.2	NBEAL1-009	2240	709aa	ENSP00000388466.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BZA0	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000434469.1	NBEAL1-004	920	230aa	ENSP00000411142.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000478884.1	NBEAL1-007	1012	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000483147.1	NBEAL1-013	449	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000492870.1	NBEAL1-006	439	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460355.1	NBEAL1-003	3595	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000497505.1	NBEAL1-005	2372	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000463830.1	NBEAL1-008	573	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000460416.2	NBEAL1-012	518	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 0, Transcript length: 2,372 bps,

Version

ENST00000497505.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000333990 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000497505.1 NBEAL1-005

Summary