Transcript: ENST00000472720.1 THSD7B-002

Description

thrombospondin, type I, domain containing 7B [Source:HGNC Symbol;Acc:29348]

Gene Synonyms

KIAA1679

Location

Chromosome 2: 137,523,115-137,814,085 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 4 domains and features, is associated with 127188 variant alleles and maps to 105 oligo probes.

Gene

This transcript is a product of gene ENSG00000144229.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq	Flags
ENST00000409968.1	THSD7B-001	6111	1606aa	ENSP00000387145.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EM75	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000272643.3	THSD7B-201	5942	1609aa	ENSP00000272643.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9C0I4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000413152.2	THSD7B-202	5849	1578aa	ENSP00000413841.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C9JKN6	NM_001080427.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000543459.1	THSD7B-203	1002	333aa	ENSP00000443370.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B4DSV0 F5H5I9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000472720.1	THSD7B-002	532	50aa	ENSP00000473349.1	Nonsense mediated decay	R4GMU2	-	-
ENST00000485379.1	THSD7B-003	563	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-	-
ENST00000480352.1	THSD7B-004	531	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 4, Coding exons: 2, Transcript length: 532 bps, Translation length: 50 residues

Version

ENST00000472720.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000331793 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000472720.1 THSD7B-002

Summary