Transcript: ENST00000409563.1 CALM2-007

Description

calmodulin 2 (phosphorylase kinase, delta) [Source:HGNC Symbol;Acc:1445]

Gene Synonyms

CALM, CALM1, CALM3, CALML2, CAM, CAM1, CAMI, CAMII, CPVT4, DD132, PHKD, PHKD2, PHKD3, caM

Location

Chromosome 2: 47,387,878-47,403,650 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 21 domains and features, is associated with 10010 variant alleles and maps to 159 oligo probes.

Gene

This transcript is a product of gene ENSG00000143933.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000272298.7	CALM2-001	1302	149aa	ENSP00000272298.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1832	B4DJ51 G3V361 P62158 Q96HY3	NM_001743.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000409563.1	CALM2-007	770	196aa	ENSP00000387065.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E7EMB3 G3V361 Q96HY3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000456319.1	CALM2-006	703	187aa	ENSP00000411440.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		G3V361 H0Y7A7 Q96HY3	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000432899.1	CALM2-002	1004	65aa	ENSP00000406112.1	Nonsense mediated decay		F8WBR5	-	-
ENST00000484408.1	CALM2-009	682	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489742.1	CALM2-008	522	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460218.1	CALM2-003	4502	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000482532.1	CALM2-004	1891	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 5, Transcript length: 770 bps, Translation length: 196 residues

Version

ENST00000409563.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000327773 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000409563.1 CALM2-007

Summary