Transcript: ENST00000457918.2 HAX1-004

Description

HCLS1 associated protein X-1 [Source:HGNC Symbol;Acc:16915]

Gene Synonyms

HCLSBP1, HS1BP1, SCN3

Location

Chromosome 1: 154,245,065-154,248,260 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 3 domains and features, is associated with 1846 variant alleles and maps to 403 oligo probes.

Gene

This transcript is a product of gene ENSG00000143575.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000328703.7	HAX1-001	1227	279aa	ENSP00000329002.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1064	E9PIQ7 O00165	NM_006118.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000483970.2	HAX1-005	1151	287aa	ENSP00000435088.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIQ7 O00165	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000457918.2	HAX1-004	914	231aa	ENSP00000411448.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44230	E9PIQ7 O00165	NM_001018837.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000435087.1	HAX1-006	822	255aa	ENSP00000394920.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VYD6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000532105.1	HAX1-013	771	151aa	ENSP00000433951.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIQ7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000447768.2	HAX1-012	842	191aa	ENSP00000403848.2	Nonsense mediated decay		O00165	-	-
ENST00000531435.1	HAX1-003	1284	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000471326.1	HAX1-002	1170	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000477780.2	HAX1-009	1089	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000492550.1	HAX1-008	733	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000459914.1	HAX1-007	726	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 914 bps, Translation length: 231 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: O00165

CCDS

This transcript is a member of the Human CCDS set: CCDS44230

Version

ENST00000457918.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000087653 (version 2)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

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Recent locations

Transcript: ENST00000457918.2 HAX1-004

Summary