Transcript: ENST00000318247.6 RORC-001

Description

RAR-related orphan receptor C [Source:HGNC Symbol;Acc:10260]

Gene Synonyms

NR1F3, RORG, RZR-GAMMA, RZRG, TOR

Location

About this transcript

This transcript has 11 exons, is annotated with 29 domains and features, is associated with 10839 variant alleles and maps to 449 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000356728.6	RORC-002	3050	497aa	ENSP00000349164.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30856	F1D8P6 P51449	NM_001001523.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000392697.3	RORC-201	2326	572aa	ENSP00000376461.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H7BYJ4	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000318247.6	RORC-001	2180	518aa	ENSP00000327025.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1004	B6ZGS6 D3DV25 P51449 Q6I9R9	NM_005060.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000480719.1	RORC-003	4141	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,180 bps, Translation length: 518 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P51449

CCDS

This transcript is a member of the Human CCDS set: CCDS1004

Version

ENST00000318247.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000036626 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.