Transcript: ENST00000470721.1 DCAF6-002

Description

DDB1 and CUL4 associated factor 6 [Source:HGNC Symbol;Acc:30002]

Gene Synonyms

1200006M05Rik, ARCAP, IQWD1, MSTP055, NRIP, PC326

Location

Chromosome 1: 167,905,911-167,993,288 forward strand.

About this transcript

This transcript has 12 exons, is annotated with 15 domains and features, is associated with 37408 variant alleles and maps to 352 oligo probes.

Gene

This transcript is a product of gene ENSG00000143164.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000367840.3	DCAF6-001	3349	951aa	ENSP00000356814.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55657	Q58WW2	NM_001198956.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000367843.3	DCAF6-011	3302	880aa	ENSP00000356817.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS1267	Q58WW2 Q9P0U0	NM_018442.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000312263.6	DCAF6-003	3186	860aa	ENSP00000311949.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30933	Q58WW2	NM_001017977.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000432587.2	DCAF6-201	3172	920aa	ENSP00000396238.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55658	Q58WW2	NM_001198957.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000470721.1	DCAF6-002	2803	472aa	ENSP00000432304.1	Nonsense mediated decay		F2Z305	-	-
ENST00000470919.1	DCAF6-008	827	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000455334.1	DCAF6-009	796	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000450548.1	DCAF6-007	724	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000491067.1	DCAF6-005	536	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000460432.1	DCAF6-010	482	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489398.1	DCAF6-004	1727	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000478668.1	DCAF6-006	494	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 2,803 bps, Translation length: 472 residues

Version

ENST00000470721.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000083660 (version 3)

Favourite species

All species

Recent locations

Transcript: ENST00000470721.1 DCAF6-002

Summary