Transcript: ENST00000485775.1 STRIP1-003

Description

striatin interacting protein 1 [Source:HGNC Symbol;Acc:25916]

Gene Synonyms

FAM40A, FAR11A, FLJ14743, KIAA1761

Location

Chromosome 1: 110,577,254-110,597,263 forward strand.

About this transcript

This transcript has 22 exons, is annotated with 4 domains and features, is associated with 9304 variant alleles and maps to 563 oligo probes.

Gene

This transcript is a product of gene ENSG00000143093.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369795.3	STRIP1-001	3265	837aa	ENSP00000358810.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS30798	Q5VSL9	NM_033088.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369796.1	STRIP1-002	3125	742aa	ENSP00000358811.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS59197	Q5VSL9	NM_001270768.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000369794.2	STRIP1-201	658	212aa	ENSP00000358809.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5VSL9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000485775.1	STRIP1-003	3363	212aa	ENSP00000476025.1	Nonsense mediated decay		Q5VSL9	-	-
ENST00000461054.1	STRIP1-007	577	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000489059.1	STRIP1-005	546	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000473429.1	STRIP1-010	4870	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000535003.1	STRIP1-006	810	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000539541.1	STRIP1-009	694	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000540970.1	STRIP1-008	536	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 22, Coding exons: 6, Transcript length: 3,363 bps, Translation length: 212 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5VSL9

Version

ENST00000485775.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000032215 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000485775.1 STRIP1-003

Summary