Transcript: ENST00000446120.2 SLC44A3-004

Description

solute carrier family 44, member 3 [Source:HGNC Symbol;Acc:28689]

Gene Synonyms

CTL3, MGC45474

Location

Chromosome 1: 95,285,898-95,360,608 forward strand.

About this transcript

This transcript has 14 exons, is annotated with 13 domains and features, is associated with 31205 variant alleles and maps to 546 oligo probes.

Gene

This transcript is a product of gene ENSG00000143036.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000271227.6	SLC44A3-001	2388	653aa	ENSP00000271227.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS44176	F8W7F3 Q8N4M1	NM_001258341.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000446120.2	SLC44A3-004	2094	617aa	ENSP00000389143.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58013	F8W7F3 Q8N4M1	NM_001258342.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000467909.1	SLC44A3-002	2061	605aa	ENSP00000432789.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS751	F8W7F3 Q8N4M1	NM_152369.4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000529450.1	SLC44A3-006	2045	620aa	ENSP00000431836.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58011	Q8N4M1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000527077.1	SLC44A3-005	1943	585aa	ENSP00000433641.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS58012	E9PIC5 Q8N4M1	NM_001258343.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000532427.1	SLC44A3-007	1912	573aa	ENSP00000436661.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		E9PIC5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000422520.2	SLC44A3-008	684	163aa	ENSP00000410832.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F8W7F3	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000532670.1	SLC44A3-010	460	109aa	ENSP00000432880.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YD35	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000475883.1	SLC44A3-003	2067	83aa	ENSP00000434457.1	Nonsense mediated decay		-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000530397.1	SLC44A3-009	1443	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 2,094 bps, Translation length: 617 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q8N4M1

CCDS

This transcript is a member of the Human CCDS set: CCDS58013

Version

ENST00000446120.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000029547 (version 5)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000446120.2 SLC44A3-004

Summary