Transcript: ENST00000369872.3 SYPL2-001

Description

synaptophysin-like 2 [Source:HGNC Symbol;Acc:27638]

Gene Synonyms

MG29, Mg29

Location

About this transcript

This transcript has 6 exons, is annotated with 14 domains and features, is associated with 6417 variant alleles and maps to 499 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000369872.3	SYPL2-001	3624	272aa	ENSP00000358888.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS41365	B4DWF6 Q5VXT5	NM_001040709.1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000401021.3	SYPL2-201	1153	208aa	ENSP00000383805.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DYR7	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000475497.1	SYPL2-002	532	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 3,624 bps, Translation length: 272 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5VXT5

CCDS

This transcript is a member of the Human CCDS set: CCDS41365

Version

ENST00000369872.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000030191 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.