Transcript: ENST00000465632.1 PGD-006

Description

phosphogluconate dehydrogenase [Source:HGNC Symbol;Acc:8891]

Gene Synonyms

6PGD, PGDH

Location

Chromosome 1: 10,459,555-10,468,197 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 4228 variant alleles and maps to 146 oligo probes.

Gene

This transcript is a product of gene ENSG00000142657.16 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000538557.1	PGD-201	1959	470aa	ENSP00000437822.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DQJ8 B4DV68 K7EM49 K7EMN2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000270776.8	PGD-001	1885	483aa	ENSP00000270776.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS113	B4DQJ8 B4DV68 K7EM49 K7EMN2 P52209	NM_002631.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000541529.1	PGD-202	1474	461aa	ENSP00000442285.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		B4DV68 F5H7U0	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000491493.1	PGD-002	806	205aa	ENSP00000466358.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EM49 K7EMN2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000460189.1	PGD-008	767	256aa	ENSP00000467362.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENST00000483936.1	PGD-007	680	224aa	ENSP00000466156.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7ELN9	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000465632.1	PGD-006	642	160aa	ENSP00000466574.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		K7EMN2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000477958.1	PGD-005	508	63aa	ENSP00000465311.1	Nonsense mediated decay		K7EJT3	-	-
ENST00000498356.1	PGD-009	790	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000496718.1	PGD-011	506	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000493288.1	PGD-010	476	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000487775.1	PGD-004	462	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 642 bps, Translation length: 160 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENST00000465632.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000005403 (version 2)

Favourite species

All species

Recent locations

Transcript: ENST00000465632.1 PGD-006

Summary