Transcript: ENST00000269349.3 EIF4A3-001

Description

eukaryotic translation initiation factor 4A3 [Source:HGNC Symbol;Acc:18683]

Gene Synonyms

DDX48, EIF4AIII, KIAA0111, NMP265, NUK34, eIF4AIII

Location

Chromosome 17: 78,109,013-78,120,982 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 15 domains and features, is associated with 5947 variant alleles and maps to 488 oligo probes.

Gene

This transcript is a product of gene ENSG00000141543.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000269349.3	EIF4A3-001	1734	411aa	ENSP00000269349.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS11767	P38919	NM_014740.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000576547.1	EIF4A3-005	553	125aa	ENSP00000460439.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		I3L3H2	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000575978.1	EIF4A3-002	3593	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000575668.1	EIF4A3-008	831	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000576573.1	EIF4A3-009	697	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000575957.1	EIF4A3-004	574	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000570625.1	EIF4A3-010	562	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-
ENST00000570837.1	EIF4A3-006	534	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,734 bps, Translation length: 411 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: P38919

CCDS

This transcript is a member of the Human CCDS set: CCDS11767

Version

ENST00000269349.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Transcript having exact match between ENSEMBL and HAVANA:	OTTHUMT00000437446 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Favourite species

All species

Recent locations

Transcript: ENST00000269349.3 EIF4A3-001

Summary