Transcript: ENST00000563492.1 CDH11-005

Description

cadherin 11, type 2, OB-cadherin (osteoblast) [Source:HGNC Symbol;Acc:1750]

Gene Synonyms

CAD11, CDHOB, OB, OSF-4

Location

Chromosome 16: 65,087,707-65,160,015 reverse strand.

About this transcript

This transcript has 2 exons, is associated with 18968 variant alleles and maps to 25 oligo probes.

Gene

This transcript is a product of gene ENSG00000140937.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000394156.3	CDH11-002	6874	693aa	ENSP00000377711.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP26 H3BPQ2 H3BQB5 H3BQH2 H3BR78 H3BSM4 P55287	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000268603.4	CDH11-001	6857	796aa	ENSP00000268603.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS10803	H3BP26 H3BPQ2 H3BQB5 H3BQH2 H3BR78 H3BSM4 H3BUU9 P55287	NM_001797.2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000566827.1	CDH11-004	2395	670aa	ENSP00000457812.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BUU9	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000567934.1	CDH11-003	1235	222aa	ENSP00000455779.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP26 H3BPQ2 H3BQB5 H3BQH2 H3BR78 H3BSM4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000562712.1	CDH11-010	613	53aa	ENSP00000455120.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP26 H3BQB5 H3BR78	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000562325.1	CDH11-017	582	22aa	ENSP00000456110.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BR78	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000562882.1	CDH11-016	569	34aa	ENSP00000455697.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BQB5 H3BR78	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000562998.1	CDH11-015	568	70aa	ENSP00000455420.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP26 H3BPQ2 H3BQB5 H3BR78 H3BSM4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000564317.1	CDH11-007	566	65aa	ENSP00000456772.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H3BP26 H3BQB5 H3BR78 H3BSM4	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000569624.1	CDH11-018	584	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000563255.1	CDH11-008	545	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000565210.1	CDH11-011	542	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000569783.1	CDH11-006	539	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000568340.1	CDH11-009	514	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000563492.1	CDH11-005	468	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000569095.1	CDH11-013	436	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000564770.1	CDH11-014	425	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-
ENST00000569128.1	CDH11-012	781	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 468 bps,

Version

ENST00000563492.1

Type

Processed transcript

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000420592 (version 1)

Favourite species

All species

Recent locations

Transcript: ENST00000563492.1 CDH11-005

Summary