Transcript: ENST00000564406.1 DET1-007

Description

de-etiolated homolog 1 (Arabidopsis) [Source:HGNC Symbol;Acc:25477]

Gene Synonyms

FLJ10103

Location

About this transcript

This transcript has 6 exons, is annotated with 2 domains and features, is associated with 18094 variant alleles and maps to 459 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq	Flags
ENST00000564406.1	DET1-007	2315	561aa	ENSP00000456340.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45343	Q7L5Y6	NM_017996.3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000268148.8	DET1-001	2267	550aa	ENSP00000268148.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45344	Q7L5Y6	NM_001144074.1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000444300.1	DET1-201	2154	561aa	ENSP00000408994.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS45343	Q7L5Y6	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000558413.1	DET1-004	583	94aa	ENSP00000453900.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		H0YN79	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000557842.1	DET1-002	2258	67aa	ENSP00000452856.1	Nonsense mediated decay		H0YK09	-	-
ENST00000557837.1	DET1-003	1925	67aa	ENSP00000452613.1	Nonsense mediated decay		H0YK09	-	-
ENST00000559656.1	DET1-006	161	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript		-	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 2,315 bps, Translation length: 561 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q7L5Y6

CCDS

This transcript is a member of the Human CCDS set: CCDS45343

Version

ENST00000564406.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Alternative transcripts

This transcript corresponds to the following database identifiers:

Havana transcript:	OTTHUMT00000432801 (version 1)

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.